#Bioinformatics

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Ivan Rossi :debian:[2504.06806] Mass Balance Approximation of Unfolding Improves Potential-Like Methods for Protein Stability Predictions<a href="https://arxiv.org/abs/2504.06806" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://arxiv.org/abs/2504.06806</a><a href="https://fosstodon.org/tags/AI" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#AI</a> <a href="https://fosstodon.org/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

Ivan Rossi :debian:[2504.03278] JanusDDG: A Thermodynamics-Compliant Model for Sequence-Based Protein Stability via Two-Fronts Multi-Head Attention<a href="https://arxiv.org/abs/2504.03278" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://arxiv.org/abs/2504.03278</a><a href="https://fosstodon.org/tags/AI" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#AI</a> <a href="https://fosstodon.org/tags/llm" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#llm</a> <a href="https://fosstodon.org/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

CSBJ🧬 Ready for AI to crack the RNA-disease code?🔗 GL4SDA: Predicting snoRNA-disease associations using GNNs and LLM embeddings. Computational and Structural Biotechnology Journal, DOI: <a href="https://doi.org/10.1016/j.csbj.2025.03.014" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://doi.org/10.1016/j.csbj.2025.03.014</a>📚 CSBJ: <a href="https://www.csbj.org/" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://www.csbj.org/</a><a href="https://mastodon.social/tags/AIinBiomedicine" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#AIinBiomedicine</a> <a href="https://mastodon.social/tags/GraphNeuralNetworks" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#GraphNeuralNetworks</a> <a href="https://mastodon.social/tags/LLM" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#LLM</a> <a href="https://mastodon.social/tags/ncRNA" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ncRNA</a> <a href="https://mastodon.social/tags/snoRNA" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#snoRNA</a> <a href="https://mastodon.social/tags/CancerResearch" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#CancerResearch</a> <a href="https://mastodon.social/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Bioinformatics</a> <a href="https://mastodon.social/tags/PrecisionMedicine" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#PrecisionMedicine</a> <a href="https://mastodon.social/tags/XAI" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#XAI</a> <a href="https://mastodon.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Genomics</a>

nf-corePipeline release! nf-core/fastquorum v1.2.0 - 1.2.0!Please see the changelog: <a href="https://github.com/nf-core/fastquorum/releases/tag/1.2.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/fastquorum/releases/tag/1.2.0</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

UK<a href="https://www.europesays.com/uk/10917/" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://www.europesays.com/uk/10917/</a> Quantitative characterization of cell niches in spatially resolved omics data <a href="https://pubeurope.com/tags/Agriculture" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Agriculture</a> <a href="https://pubeurope.com/tags/AnimalGeneticsAndGenomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#AnimalGeneticsAndGenomics</a> <a href="https://pubeurope.com/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Bioinformatics</a> <a href="https://pubeurope.com/tags/Biomedicine" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Biomedicine</a> <a href="https://pubeurope.com/tags/CancerResearch" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#CancerResearch</a> <a href="https://pubeurope.com/tags/DataMining" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#DataMining</a> <a href="https://pubeurope.com/tags/GeneExpressionAnalysis" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#GeneExpressionAnalysis</a> <a href="https://pubeurope.com/tags/GeneFunction" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#GeneFunction</a> <a href="https://pubeurope.com/tags/general" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#general</a> <a href="https://pubeurope.com/tags/Genetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Genetics</a> <a href="https://pubeurope.com/tags/HumanGenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#HumanGenetics</a> <a href="https://pubeurope.com/tags/Science" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Science</a> <a href="https://pubeurope.com/tags/software" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#software</a> <a href="https://pubeurope.com/tags/Transcriptomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Transcriptomics</a> <a href="https://pubeurope.com/tags/UK" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#UK</a> <a href="https://pubeurope.com/tags/UnitedKingdom" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#UnitedKingdom</a>

Luke PembletonAnyone else finding the sequencing costs appear to be getting more expensive rather then continuing to decline. I'm thinking its likely related to inflation, wages and current US uncertainty...? oh and Illumina and alike only delivering true reduced cost/GB on large scale flowcells, which aren't suitable for many small to medium size projects... <a href="https://genomic.social/tags/genomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#genomics</a> <a href="https://genomic.social/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

Bioinfhotep<a href="https://github.com/GabrielHoffman/GenomicDataStream" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/GabrielHoffman/GenomicDataStream</a> <a href="https://genomic.social/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Bioinformatics</a> <a href="https://genomic.social/tags/Rstats" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Rstats</a> <a href="https://genomic.social/tags/GenomicsIO" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#GenomicsIO</a> <a href="https://genomic.social/tags/StatGen" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#StatGen</a>

bioinfhotep<a href="https://github.com/GabrielHoffman/GenomicDataStream" rel="nofollow noopener noreferrer" target="_blank">github.com/GabrielHoffm...</a> <a class="hashtag" href="https://bsky.app/search?q=%23Bioinformatics" rel="nofollow noopener noreferrer" target="_blank">#Bioinformatics</a> <a class="hashtag" href="https://bsky.app/search?q=%23rstats" rel="nofollow noopener noreferrer" target="_blank">#rstats</a> <a class="hashtag" href="https://bsky.app/search?q=%23GenomicsIO" rel="nofollow noopener noreferrer" target="_blank">#GenomicsIO</a> <a class="hashtag" href="https://bsky.app/search?q=%23StatGen" rel="nofollow noopener noreferrer" target="_blank">#StatGen</a> <a href="https://github.com/GabrielHoffman/GenomicDataStream" rel="nofollow noopener noreferrer" target="_blank">GitHub - GabrielHoffman/Genomi...</a>

Molecular Biology & EvolutionNew graph-based tool ska lo enables reference-free detection of SNPs, indels, and variant groups from pathogen WGS data. Benchmarking shows high sensitivity, including in regions with dense mutations.Link: <a href="https://doi.org/10.1093/molbev/msaf077" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://doi.org/10.1093/molbev/msaf077</a><a href="https://ecoevo.social/tags/NewPaperAlert" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#NewPaperAlert</a> <a href="https://ecoevo.social/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a> <a href="https://ecoevo.social/tags/variantcalling" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#variantcalling</a> <a href="https://ecoevo.social/tags/genomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#genomics</a>

nf-corePipeline release! nf-core/oncoanalyser v2.0.0 - 2.0.0 - Flame Robin!Please see the changelog: <a href="https://github.com/nf-core/oncoanalyser/releases/tag/2.0.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/oncoanalyser/releases/tag/2.0.0</a><a href="https://mstdn.science/tags/cancer" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#cancer</a> <a href="https://mstdn.science/tags/clinical" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#clinical</a> <a href="https://mstdn.science/tags/dna" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#dna</a> <a href="https://mstdn.science/tags/exome" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#exome</a> <a href="https://mstdn.science/tags/ngs" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ngs</a> <a href="https://mstdn.science/tags/panel" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#panel</a> <a href="https://mstdn.science/tags/rna" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#rna</a> <a href="https://mstdn.science/tags/targeted" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#targeted</a> <a href="https://mstdn.science/tags/wgs" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#wgs</a> <a href="https://mstdn.science/tags/wigits" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#wigits</a> <a href="https://mstdn.science/tags/wts" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#wts</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/rnavar v1.1.0 - nf-core/rnavar 1.1.0 - Mighty Milano!Please see the changelog: <a href="https://github.com/nf-core/rnavar/releases/tag/1.1.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/rnavar/releases/tag/1.1.0</a><a href="https://mstdn.science/tags/gatk4" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#gatk4</a> <a href="https://mstdn.science/tags/rna" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#rna</a> <a href="https://mstdn.science/tags/rnaseq" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#rnaseq</a> <a href="https://mstdn.science/tags/variantcalling" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#variantcalling</a> <a href="https://mstdn.science/tags/worflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#worflow</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

Boas PuckerExcited to share our latest preprint about CoExpPhylo: <a href="https://doi.org/10.1101/2025.04.03.647051" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://doi.org/10.1101/2025.04.03.647051</a>.Not long ago, Nele excelled at a <a href="https://mastodon.social/tags/Python" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Python</a> course for life scientists and acquired crucial skills for this work <a href="https://mastodon.social/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Bioinformatics</a> <a href="https://mastodon.social/tags/DataScience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#DataScience</a> <a href="https://genomic.social/@PuckerLab" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@PuckerLab</a>

OpenSource23 Best Free and Open Source Linux Bioinformatics Tools Bioinformatics has been defined in many d... <a href="https://www.linuxtoday.com/blog/23-best-free-and-open-source-linux-bioinformatics-tools/" rel="nofollow noopener noreferrer" target="_blank">https://www.linuxtoday.com/blog/23-best-free-and-open-source-linux-bioinformatics-tools/</a> <a rel="nofollow noopener noreferrer" class="mention hashtag" href="https://mastodon.social/tags/Blog" target="_blank">#Blog</a> <a rel="nofollow noopener noreferrer" class="mention hashtag" href="https://mastodon.social/tags/Bioinformatics" target="_blank">#Bioinformatics</a> <a rel="nofollow noopener noreferrer" class="mention hashtag" href="https://mastodon.social/tags/Linux" target="_blank">#Linux</a> <a rel="nofollow noopener noreferrer" class="mention hashtag" href="https://mastodon.social/tags/Bioinformatics" target="_blank">#Bioinformatics</a> <a href="https://awakari.com/pub-msg.html?id=REotFeJD89Zo5QaCON0r9cJpwlU" rel="nofollow noopener noreferrer" target="_blank">Event Attributes</a>

Academic EuropeJob - Alert 💊🩺 Doktorand*in (m/w/d) LaboratoriumsmedizinDeadline: 2025-05-09Location: Germany, Dresden, Sachsen <a href="https://www.academiceurope.com/job/?id=7376" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://www.academiceurope.com/job/?id=7376</a><a href="https://mstdn.business/tags/hiring" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#hiring</a> <a href="https://mstdn.business/tags/PhD" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#PhD</a> <a href="https://mstdn.business/tags/LaboratoryMedicine" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#LaboratoryMedicine</a> <a href="https://mstdn.business/tags/medicine" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#medicine</a> <a href="https://mstdn.business/tags/Biochemistry" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Biochemistry</a> <a href="https://mstdn.business/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Bioinformatics</a> <a href="https://mstdn.business/tags/Biotechnology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Biotechnology</a> <a href="https://mstdn.business/tags/ComputationalBiochemistry" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ComputationalBiochemistry</a> <a href="https://mstdn.business/tags/ComputationalBiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ComputationalBiology</a>

Nicola RomanòOur new preprint is now out! Dynamic transcriptional heterogeneity in pituitary corticotrophs<a href="https://www.biorxiv.org/content/10.1101/2025.04.04.645979v1" rel="nofollow noopener noreferrer" target="_blank">https://www.biorxiv.org/content/10.1101/2025.04.04.645979v1</a>We analysed publicly available single-cell RNA sequencing data of pituitary gland tissue and looked at corticotrophs, cells that are central to mediate stress responses.We identified several transcriptional states in these cells that are related to how they respond to stress. Cells are able to transition between these states and this might be helpful for them to respond to stress coming at unpredictable times.We also highlight issues related to using scRNAseq to look at functional subpopulations of cells.<a href="https://qoto.org/tags/scrnaseq" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#scrnaseq</a> <a href="https://qoto.org/tags/stress" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#stress</a> <a href="https://qoto.org/tags/physiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#physiology</a> <a href="https://qoto.org/tags/cellbiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#cellbiology</a> <a href="https://qoto.org/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a> <a href="https://qoto.org/tags/corticotrophs" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#corticotrophs</a> <a href="https://qoto.org/tags/pituitary" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#pituitary</a>

CSBJ🧬Can we trust AI in bioinformatics if we don’t understand how it makes decisions? As AI becomes central to bioinformatics, the opacity of its decision-making remains a major concern. 🔗 Demystifying the Black Box: A Survey on Explainable Artificial Intelligence (XAI) in Bioinformatics. Computational and Structural Biotechnology Journal, DOI: <a href="https://doi.org/10.1016/j.csbj.2024.12.027" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://doi.org/10.1016/j.csbj.2024.12.027</a>📚 CSBJ: <a href="https://www.csbj.org/" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://www.csbj.org/</a><a href="https://mastodon.social/tags/XAI" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#XAI</a> <a href="https://mastodon.social/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Bioinformatics</a> <a href="https://mastodon.social/tags/AIethics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#AIethics</a> <a href="https://mastodon.social/tags/ExplainableAI" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ExplainableAI</a> <a href="https://mastodon.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Genomics</a> <a href="https://mastodon.social/tags/AI" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#AI</a> <a href="https://mastodon.social/tags/BiomedicalAI" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#BiomedicalAI</a> <a href="https://mastodon.social/tags/MachineLearning" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#MachineLearning</a>

Genomics Daily 🧬🤖🧬 Neural networks crack the chromatin code! CGLoop reveals stunning 3D genome architecture, transforming how we predict gene expression. Mind = blown 🤯 <a href="https://genomic.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Genomics</a> <a href="https://genomic.social/tags/MachineLearning" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#MachineLearning</a> <a href="https://genomic.social/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Bioinformatics</a> <a href="https://emmecola.github.io/genomics-daily" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://emmecola.github.io/genomics-daily</a>

nf-corePipeline release! nf-core/ampliseq v2.13.0 - Ampliseq Version 2.13.0!Please see the changelog: <a href="https://github.com/nf-core/ampliseq/releases/tag/2.13.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/ampliseq/releases/tag/2.13.0</a><a href="https://mstdn.science/tags/16s" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#16s</a> <a href="https://mstdn.science/tags/18s" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#18s</a> <a href="https://mstdn.science/tags/ampliconsequencing" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ampliconsequencing</a> <a href="https://mstdn.science/tags/edna" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#edna</a> <a href="https://mstdn.science/tags/illumina" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#illumina</a> <a href="https://mstdn.science/tags/iontorrent" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#iontorrent</a> <a href="https://mstdn.science/tags/its" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#its</a> <a href="https://mstdn.science/tags/metabarcoding" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#metabarcoding</a> <a href="https://mstdn.science/tags/metagenomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#metagenomics</a> <a href="https://mstdn.science/tags/microbiome" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#microbiome</a> <a href="https://mstdn.science/tags/pacbio" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#pacbio</a> <a href="https://mstdn.science/tags/qiime2" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#qiime2</a> <a href="https://mstdn.science/tags/rrna" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#rrna</a> <a href="https://mstdn.science/tags/taxonomicclassification" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#taxonomicclassification</a> <a href="https://mstdn.science/tags/taxonomicprofiling" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#taxonomicprofiling</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/mag v3.4.0 - mag 3.4.0 - Green Gecko!Please see the changelog: <a href="https://github.com/nf-core/mag/releases/tag/3.4.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/mag/releases/tag/3.4.0</a><a href="https://mstdn.science/tags/annotation" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#annotation</a> <a href="https://mstdn.science/tags/assembly" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#assembly</a> <a href="https://mstdn.science/tags/binning" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#binning</a> <a href="https://mstdn.science/tags/longreadsequencing" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#longreadsequencing</a> <a href="https://mstdn.science/tags/metagenomes" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#metagenomes</a> <a href="https://mstdn.science/tags/metagenomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#metagenomics</a> <a href="https://mstdn.science/tags/nanopore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nanopore</a> <a href="https://mstdn.science/tags/nanoporesequencing" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nanoporesequencing</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

Luke PembletonCloud computing: where you're not just a bioinformatician, you’re also the finance manager, compliance officer, and IT support, all while carrying a hefty dose of mental fatigue. I miss those PhD days with a inhouse HPC when all you had to do was sbatch every parameter combo under the sun to test your research question… then complain about queue times and who was clogging the damn cluster with their BLAST jobs 😅 <a href="https://genomic.social/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

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